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Refereed Journal Articles

Draghi JA and Whitlock MC (2015) Robustness to noise in gene expression evolves despite epistatic constraints in a model of gene networks. Evolution 69 (9), 2345-2358.

Schulte MB, Draghi JA, Plotkin JB and Andino R (2015) Experimentally guided models reveal replication principles that shape the mutation distribution of RNA viruses. eLife 4, e03753

Draghi JA and Whitlock MC (2014) Overdominance interacts with linkage to determine the rate of adaptation to a new optimum. Journal of Evolutionary Biology.

Chou HH, Delaney NF, Draghi JA and Marx CJ (2014) Mapping the fitness landscape of gene expression uncovers the cause of antagonism and sign epistasis between adaptive mutations. PLoS Genetics 10 (2), e1004149

Draghi JA and Plotkin JB (2013) Selection biases the prevalence and type of epistasis among beneficial substitutions. Evolution, early view online. PDF

Draghi JA and Whitlock MC (2012) Phenotypic plasticity facilitates mutational variance, genetic variance, and evolvability along the major axis of environmental variation. Evolution 66(9): 2891-2902. PDF

Turner PE, Draghi JA, Wilpiszeski R (2011) High-throughput analysis of growth differences among phage strains. Journal of Microbiological MethodsPDF

Draghi JA, Parsons T, Plotkin JB (2011) Epistasis increases the rate of conditionally neutral substitution in an adapting population. Genetics 187(4): 1139-1152. PDF

Draghi JA, Parsons T, Wagner GP, Plotkin JB (2010) Mutational robustness can facilitate adaptation. Nature 464 (7278): 353-355. PDF

Draghi JA and Wagner GP (2009) The evolutionary dynamics of evolvability in a gene network model. Journal of Evolutionary Biology, 22(3): 599-611. PDF

Draghi JA and Wagner GP. (2008) Evolution of evolvability in a developmental model. Evolution 62(2): 301-315. PDF

Draghi JA and Turner PE (2006) DNA secretion and gene-level selection in bacteria. Microbiology-SGM 152: 2683-2688. PDF

Invited Perspectives

Kryazhimskiy S, Draghi JA, Plotkin JB (2011) In evolution, the sum is less than its parts. Science 332(6034): 1160-1161. PDF

Draghi JA, Plotkin JB (2011) Hidden diversity sparks adaptation. Nature 474(7349): 45-46. PDF

Wagner GP and Draghi JA (2010) Evolution of Evolvability in Evolution: The Extended Synthesis, eds. M. Pigliucci and G.B. Müller, p. 379-400. amazon

Book Reviews

Draghi JA, Plotkin JB. (2012) Reviewed Andreas Wagner’s The Origins of Evolutionary Innovations. Bioessays 34: 518–520. PDF

Draghi JA (2012) Reviewed David L. Stern’s Evolution, Development, & the Predictable Genome. The Quarterly Review of Biology 87(1): 69. PDF